Publications

Dunn Jr, WA, LA Schroder, JP Aris.  2013.  Historical overview of autophagy.  Autophagy and Cancer, Current Cancer Research (vol 8), H-G Wang, Ed, Springer , NY. 

Aris, JP, AL Alvers, RA Ferraiuolo, LK Fishwick, A Hanvivatpong, D Hu, C Kirlew, MT Leonard, KJ Losin, M Marraffini, AY Seo, V Swanberg, JL Westcott, MS Wood, C Leeuwenburgh, and WA Dunn, Jr.  2013.  Autophagy and leucine promote chronological longevity and respiration proficiency during calorie restriction in yeast.  Exp. Gerontology  In press. 

Aris, JP, LK Fishwick, ML Marraffini, AY Seo, C Leeuwenburgh, and WA Dunn, Jr.  2012.  Amino Acid Homeostasis and Chronological Longevity in Saccharomyces cerevisiae.  In Aging Research in Yeast.  M Brietenbach, P Laun, SM Jazwinski, Eds.  Springer, NY.  Subcell Biochem57:161-86.  [PDF]

Aris, JP, MC Elios, E Bimstein, SM Wallet, S Cha, KN Lakshmyya, and J Katz.  2010.  Gingival RAGE expression in calorie restricted versus ad libitum fed rats.  J Periodontology  81:1481-7.  [PDF]

Seo AY, A-M Joseph, D Dutta, JCY Hwang, JP Aris, C Leeuwenburgh.  2010.  New insights into the role of mitochondria in aging: mitochondrial dynamics and more.  J Cell Sci.  123:2533-42.  [PDF]

Falcon, AA, S Chen, MS Wood, and JP Aris.  2010.  Acetyl-coenzyme A synthetase 2 is a nuclear protein required for replicative longevity in Saccharomyces cerevisiaeMol Cell Biochem.   333:99-108.  [PDF]

Alvers, AL, LK Fishwick, MS Wood, D Hu, HS Chung, WA Dunn, Jr, and JP Aris.  2009.  Autophagy and amino acid homeostasis are required for chronological longevity in Saccharomyces cerevisiaeAging Cell  8:353-359.  [PDF]

Alvers, AL, MS Wood, D Hu, AC Kaywell, WA Dunn, Jr, and JP Aris.  2009.  Autophagy is required for extension of yeast chronological life span by rapamycin.  Autophagy  5:847-9.  [PDF]

Pafundi, D, C Lee, . Watchman, V Bourke, J Aris, N Shagina, J Harrison, T Fell, and W Bolch.  An image-based skeletal tissue model for the ICRP reference newborn.  2009.  Phys Med Biol  54:4497-531.

Bhabhra, R, DL Richie, HS Kim, WC Nierman, J Fortwendel, JP Aris, JC Rhodes, and DS Askew.  2008.  Impaired ribosome biogenesis disrupts the integration between morphogenesis and nuclear duplication during the germination of Aspergillus fumigatus.  Eukaryotic Cell  7:575-583.

Swanson, MS, and JP Aris.  2008.  Post-transcriptional control: nuclear RNA processing.  In Inborn errors of development.  Second Edition.  CJ Epstein, RP Erickson, A Wynshaw-Boris, Eds.  Oxford University Press.  Oxford, UK.  pp1108-1125.

Urbinati, CR, GB Gonsalvez, JP Aris and RM Long.  2006.  Loc1p is required for efficient assembly and nuclear export of the 60S ribosomal subunit.  Mol Genet Genomics 276:369-377. 

Oakes, ML, I Siddiqi, SL French, L Vu, M Sato, JP Aris, AL Beyer, and M Nomura.  2006.  Role of histone deacetylase Rpd3 in regulating rDNA transcription and nucleolar structure in yeast.  Mol Cell Biol  26:3889-3901.

Falcon, AA, N Rios, and JP Aris.  2005.  2-micron circle plasmids do not reduce yeast life span.  FEMS Microbiol Let250:245-251.

Thomson, JM, EA Gaucher, MF Burgan,  DW DeKee, T Li, JP Aris, and SA Benner.  2005.  Resurrecting ancestral alcohol dehydrogenases from yeast.  Nat Genet37:630-635.

Falcon, AA, and JP Aris.  2003.  Plasmid accumulation reduces life span in Saccharomyces cerevisiaeJ Biol Chem278:41607-41617.

Lu, M, S Vergara, L Zhang, LS Holliday, JP Aris, and SL Gluck.  2002.  The amino-terminal domain of the E subunit of V-ATPase interacts with the H subunit and is required for V-ATPase function.  J Biol Chem  277:38409-15.

Hong, B, K Wu, JS Brockenbrough, P Wu, and JP Aris.  2001.  Temperature sensitive nop2 alleles defective in synthesis of 25S rRNA and large ribosomal subunits in Saccharomyces cerevisiaeNucleic Acids Res. 29:2927-37.

Wu, K, P Wu, and JP Aris.  2001.  Nucleolar protein Nop12p participates in synthesis of 25S rRNA in Saccharomyces cerevisiaeNucleic Acids Res. 29:2938-49.

Fahrenkrog, B, JP Aris, EC Hurt, N Pante, and U Aebi.  2000.  Comparative spatial localization of protein-A-tagged and authentic yeast nuclear pore complex proteins by immunogold electron microscopy.  J. Struct Biol  129:295-305.

Nelson, SA, JP Aris, BKR Patel, and WJ LaRochelle.  2000.  Multiple growth factor transcriptional activation of SAN5, a murine early response gene that complements a lethal defect in yeast ribosome biogenesis.  J Biol Chem275:13835-13841.

Wu, K, JH Dawe, JP Aris.  2000.  Expression and subcellular localization of a membrane protein related to Hsp30p in Saccharomyces cerevisiae.  Biochim Biophys Acta  1463:477-482.

Oakes, ML, I Siddiqi, L Vu, JP Aris, and M Nomura.  1999.  Transcription factor UAF, expansion and contraction of ribosomal DNA (rDNA) repeats, and RNA polymerase switch in transcription of yeast rDNA.  Mol Cell Biol  19:8559-8569. 

Tolerico, LH, AL Benko, JP Aris, DR Stanford, NC Martin, and AK Hopper.  1999.  Saccharomyces cerevisiae Mod5p-II contains sequences antagonistic for nuclear and cytosolic locations.  Genetics  151:57-75.

Oakes, M, J P Aris, JS Brockenbrough, H Wai, L Vu, and M Nomura. 1998.  Mutational analysis of the structure and localization of the nucleolus in the yeast Saccharomyces cerevisiaeJ. Cell Biol143:23-34.

Wu, P, JS Brockenbrough, MR Paddy, and JP Aris.  1998.  NCL1, a novel gene for a non-essential nuclear protein in Saccharomyces cerevisiaeGene  220:109-117.

Wu, P, JS Brockenbrough, A Metcalfe, S Chen, and JP Aris.  1998.  Nop5p is a small nucleolar ribonucleoprotein component required for pre-18S rRNA processing in yeast.  J Biol Chem273:16453-63.

Dove, JE, JS Brockenbrough, and JP Aris.  1998.  Isolation of nuclei and nucleoli from the yeast Saccharomyces cerevisiae.  (M. Berrios, ed.)  Methods Cell Biol53:33-46.

Chen, S, JE Dove, JS Brockenbrough, and JP Aris.  1997.  Homocitrate synthase is located in the nucleus in the yeast Saccharomyces cerevisiaeJ Biol Chem272:10839-10846.

Hong, B, JS Brockenbrough, P Wu, and JP Aris.  1997.  Nop2p is required for pre-rRNA processing and 60S ribosome subunit synthesis in yeast.  Mol Cell Biol17:378-388.

Zimowska, G, JP Aris, and MR Paddy.  1997.  A Drosophila Tpr protein homolog is localized both in the extrachromosomal channel network and to nuclear pore complexes.  J Cell Sci  110:927-944.

deBeus, E, JS Brockenbrough, B Hong, and JP Aris.  1994.  Yeast NOP2 encodes an essential nucleolar protein with homology to a human proliferation marker.  J Cell Biol  127:1799-1813. 

Monestier, M, MJ Losman, KE Novick, and JP Aris.  1994.  Molecular analysis of mercury-induced anti-nucleolar antibodies in H-2S mice.  J Immunol  151:667-75. 

Aris, JP, PV Basta, WD Holmes, LM Ballas, C Moomaw, NB Rankl, G Blobel, CR Loomis, and D J. Burns.  1993.  Molecular and biochemical characterization of a recombinant human PKC-delta family member.  Biochim Biophys Acta  1174:171-181.

Aris, JP, and G Blobel.  1991.  cDNA cloning and sequencing of human fibrillarin, a conserved nucleolar protein recognized by autoimmune antisera.  Proc Natl Acad Sci USA  88:931-935.

Aris, JP, and G Blobel.  1991.  The isolation of yeast nuclei.  Methods Enzymol (Guthrie & Fink, eds)  194:735-749.

Henriquez, R, G Blobel, and JP Aris.  1990.  Isolation and sequencing of NOP1:  a yeast gene encoding a nucleolar protein homologous to a human autoimmune antigen.  J Biol Chem  265:2209-2215.

Aris, JP, and G Blobel.  1989.  Yeast nuclear envelope proteins cross react with an antibody against mammalian pore complex proteins.  J Cell Biol  108:2059-2067.

Aris, JP, and G Blobel.  1988.  Identification and characterization of a yeast nucleolar protein that is similar to a rat liver nucleolar protein.  J Cell Biol  107:17‑31.

Aris, JP, and RD Simoni.  1985.  The beta subunit of the Escherichia coli ATP synthase exhibits a tight membrane binding property.  Biochem Biophys Res Commun  128:155-162.

Aris, JP, DJ Klionsky, and RD Simoni.  1985.  The Fo subunits of the Escherichia coli F1Fo-ATP synthase are sufficient to form a functional proton pore.  J Biol Chem  260:11207-11215.

Aris, JP, and RD Simoni.  1983.  Cross-linking and labeling of the Escherichia coli F1Fo-ATP synthase reveal a compact hydrophilic portion of Fo close to an F1 catalytic subunit.  J Biol Chem  258:14599-14609.

Aris, JP, AD Eisemann, and L Moulton.  1982.  The occurrence of Pugettia richii (Crustacea: Decapoda) on Cystoseira osmundacea follows a diel pattern.  Bulletin Marine Sci  32:243-249.

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